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( A ) Maximum likelihood tree constructed based on 240 CVA16 VP1 sequences in Shenyang from 2013 to 2023. Bootstrap values are indicated by solid circles, and the circle size represents the size of the bootstrap value. The outer circle represents CVA16 from different years, and CVA16 sequences from Shenyang are marked with an asterisks. The inner circle represents different genogroups/sub-genogroups marked with different colors. ( B ) Time-scaled phylogenetic tree based on complete VP1 <t>nucleotide</t> sequences of CVA16 strains in Shenyang. ( C ) Genetic distance matrix of CVA16 nucleotide sequences from different years.
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sequence identity matrix  (Bioedit Company)
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( A ) Maximum likelihood tree constructed based on 240 CVA16 VP1 sequences in Shenyang from 2013 to 2023. Bootstrap values are indicated by solid circles, and the circle size represents the size of the bootstrap value. The outer circle represents CVA16 from different years, and CVA16 sequences from Shenyang are marked with an asterisks. The inner circle represents different genogroups/sub-genogroups marked with different colors. ( B ) Time-scaled phylogenetic tree based on complete VP1 <t>nucleotide</t> sequences of CVA16 strains in Shenyang. ( C ) Genetic distance matrix of CVA16 nucleotide sequences from different years.
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sequence identity matrix tool  (Bioedit Company)
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( A ) Maximum likelihood tree constructed based on 240 CVA16 VP1 sequences in Shenyang from 2013 to 2023. Bootstrap values are indicated by solid circles, and the circle size represents the size of the bootstrap value. The outer circle represents CVA16 from different years, and CVA16 sequences from Shenyang are marked with an asterisks. The inner circle represents different genogroups/sub-genogroups marked with different colors. ( B ) Time-scaled phylogenetic tree based on complete VP1 <t>nucleotide</t> sequences of CVA16 strains in Shenyang. ( C ) Genetic distance matrix of CVA16 nucleotide sequences from different years.
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https://www.bioz.com/result/sequence identity matrix tool/product/Bioedit Company
Average 90 stars, based on 1 article reviews
sequence identity matrix tool - by Bioz Stars, 2026-02
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( A ) Maximum likelihood tree constructed based on 240 CVA16 VP1 sequences in Shenyang from 2013 to 2023. Bootstrap values are indicated by solid circles, and the circle size represents the size of the bootstrap value. The outer circle represents CVA16 from different years, and CVA16 sequences from Shenyang are marked with an asterisks. The inner circle represents different genogroups/sub-genogroups marked with different colors. ( B ) Time-scaled phylogenetic tree based on complete VP1 nucleotide sequences of CVA16 strains in Shenyang. ( C ) Genetic distance matrix of CVA16 nucleotide sequences from different years.

Journal: Viruses

Article Title: Epidemiology of Hand, Foot, and Mouth Disease and Genetic Characterization of Coxsackievirus A16 in Shenyang, Liaoning Province, China, 2013–2023

doi: 10.3390/v16111666

Figure Lengend Snippet: ( A ) Maximum likelihood tree constructed based on 240 CVA16 VP1 sequences in Shenyang from 2013 to 2023. Bootstrap values are indicated by solid circles, and the circle size represents the size of the bootstrap value. The outer circle represents CVA16 from different years, and CVA16 sequences from Shenyang are marked with an asterisks. The inner circle represents different genogroups/sub-genogroups marked with different colors. ( B ) Time-scaled phylogenetic tree based on complete VP1 nucleotide sequences of CVA16 strains in Shenyang. ( C ) Genetic distance matrix of CVA16 nucleotide sequences from different years.

Article Snippet: The identity matrix of nucleotide sequences was generated using BioEdit (version 7.0.9.0) [ ].

Techniques: Construct